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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899138.1_cds_XP_016449110.1_43697
CDS Infomation

[gene=LOC107774144] [db_xref=GeneID:107774144] [protein=nuclear pore complex protein NUP98A-like isoform X2] [protein_id=XP_016449110.1] [location=join(186265..186295,186421..186633,186828..187037,187124..187800,188017..188080,188163..188205,188431..188566,189024..189140,189313..189478,190182..190552,190745,191026..191231)] [gbkey=CDS]
Sequence

ATGTTAGTAATAACTGCAATATCTCAGTATGGAACCACATCCTTTAATGCAACAAACAAT
GCTACAGCTTTTCAAACACAAGGCAAATCTCTGGGCTCGTCGTCCACTTTACCAACATTT
GGAAAGAAATATGAAGGTAATAGCGTGGCCTATAAACCTCTGCTGTGGTCCAGAGATGCC
AGTGTTTCAGACTCCTCAATATTTGGTTCCTACTCCTTCGGCCAGCCTGCAGTATCCACG
TCAGGTAAAATAGTTACTACGCCATTGCTCAAGAGCTCTGATTTTGGAAAGTCAACTTTC
GGTATTAATAAGAAAGGAAGTAGAATGGCATCATACACTGCAACTAAAGAGAAAGAGAGC
AAGGAAAAGATTCAATCCATCTGTGGCATGCAGACTTATGAAGATAAAAGCCACGAAGAG
TTGAGGTTTGAGGACTATCAGTTAGGTGATAAAGGTCAGACATGTGCTTCTATATTTGAT
GTTTCAGGCACATCTAAATTTGGTGTCATTGACAAATCCAGGCCTTTCACATCACCGGTA
TTTAACCCATCAACTGTTGATCAACCTTTTCATTCTCATTGTCCAAATCCATTTGCCTTG
AAAAGACCAGGGATTGACTCACTACCAAATGAGAATTCTAGCACAACTTTATCTACCCTA
CTATTTCCAAAGTCACAGCAGTCAACTGTTTCCCATATATTCCCCACCAAAACATCATTC
TTAAACTCTACTGGCTCAGATGTTTCATCTCCATTGACCAATTCAAGCCCTTTTGCACCT
TTAAAAGCGGCTTCCACTTCTTCCACTAGCTCCATCTTTTCTCCGTCAAGTAATCCATGG
GCTTTATCAACGTCTTCTGCTCTATCGTCTCCACCGTCTACTAGTTCTCCATATTTGGTC
TCACCTTCCCCAGCCCATCATTTTGATCAGAATCGCTCTTTCTCTCCTTTCAACTTGCCC
ACCTTACCTACTGTATCACCGCCATCCCTTCTTCCAACTCCTGTCTCGACTACAGCACCA
GCTCAATCATCCTGGCAGTTGCAGCCTACTTTACCAAGCCTTTTTAATGTTCCAAGCACA
CCATCCTCTTTGTTTCCCACATTCGTTCCACTTGCTCCTAGTCAAATTACTCCAGAAAAG
ACTCCTAATATTGAAGCAAAAATTTCACCGGCCATCTCTTCTCAGCCATTGACAGAAAAT
GGACAAGGAGTTGGTCATCCGGGTATCAATGTGCAACAGTCTTACTCTCCAAGCATCACA
GGATTGCAGCCATCACCAATTATGGTTCCTTCTGAAACACAACCCGCGGTCCAGGTATTC
GTTGGACGCCCAGATTCGGCAACATCCGTGCAGTATGGAATATCAAGCTTACCTGTTTCT
GACAAAACTGCTCCGGTCAGACGAAGATCCTCGTTGATAATACGACATTCATCTATAAGT
CGGCATAGGTTGCCACCTCAAAAATACAATCCTACTAGTGATAAACCAAAGGTTCCCTTT
TTTATGGATAAAGAAAACGCTTCTGGCATAGTAAGCAACAAAGATGTGATCATTTCAAGG
GAAAATCCAAGGGATTGGGTTCGTCCTACCACTAGAGAATTTCCTTTGGGGTCTGATTTA
TGTAGATTGTCTCAACTGAAGCATGCATCCGCGGATGGGATGGACGATGGAGTCAAGGTT
AATGACAGTTGTGACAAGCCTAACATAGCACCTGAAGAGAAGATGCATTATGATAAATCT
GGACATTGTGTCCAAGTTTCACTTGAAAGTGAGGATGTTGACGCCATAATGCCCAAGCTC
CAACGCGCTGATTACTACACAGCTCCTCCAATGCAGGAATTGATATCAAAGGAGAAGGAA
GATCCTGGTTTCTGTTGCCACGTGAAGGACTTTGTGGTAGGAAGACATGGCTATGGAAGC
ATCAAGTTCTTGGGAGAAACAGATGTCCGGAATCTTGATCTTGATTCTGCTGTCCATTTT
AAGTGTCGTGAGGTAATCATCTATATGGACGAGAGCAAGAAACCTCCAGTTGGACAAGGC
CTCAACAAGCCAGCTGAAATAACTCTCCTTAATGTCAAATGCATCAACAAATTGAACGGG
AAGGAGTACACAGATGGACCAGTGGTCAATAAGTACAGAGATATGCTTGTTAAGAAAGCA
GTGGAGCAAAGTGCAGAATTTGTTTCGTATGATCCAGTGGAAGGGCAGTGGAAATTTAGG
GTGTCACACTTCTAG

Peptide Sequence

PEP ID

XP_016449110.1
PEP Infomation

PREDICTED: nuclear pore complex protein NUP98A-like isoform X2 [Nicotiana tabacum]
Sequence

MLVITAISQYGTTSFNATNNATAFQTQGKSLGSSSTLPTFGKKYEGNSVAYKPLLWSRDA
SVSDSSIFGSYSFGQPAVSTSGKIVTTPLLKSSDFGKSTFGINKKGSRMASYTATKEKES
KEKIQSICGMQTYEDKSHEELRFEDYQLGDKGQTCASIFDVSGTSKFGVIDKSRPFTSPV
FNPSTVDQPFHSHCPNPFALKRPGIDSLPNENSSTTLSTLLFPKSQQSTVSHIFPTKTSF
LNSTGSDVSSPLTNSSPFAPLKAASTSSTSSIFSPSSNPWALSTSSALSSPPSTSSPYLV
SPSPAHHFDQNRSFSPFNLPTLPTVSPPSLLPTPVSTTAPAQSSWQLQPTLPSLFNVPST
PSSLFPTFVPLAPSQITPEKTPNIEAKISPAISSQPLTENGQGVGHPGINVQQSYSPSIT
GLQPSPIMVPSETQPAVQVFVGRPDSATSVQYGISSLPVSDKTAPVRRRSSLIIRHSSIS
RHRLPPQKYNPTSDKPKVPFFMDKENASGIVSNKDVIISRENPRDWVRPTTREFPLGSDL
CRLSQLKHASADGMDDGVKVNDSCDKPNIAPEEKMHYDKSGHCVQVSLESEDVDAIMPKL
QRADYYTAPPMQELISKEKEDPGFCCHVKDFVVGRHGYGSIKFLGETDVRNLDLDSAVHF
KCREVIIYMDESKKPPVGQGLNKPAEITLLNVKCINKLNGKEYTDGPVVNKYRDMLVKKA
VEQSAEFVSYDPVEGQWKFRVSHF

Transcript Sequence

Gene sequence data has not been registered.